Publications
Publications from the group, updated every week from PubMed. See also Google Scholar.
157 papers · checked against PubMed on 7 November 2026
- 2026
- 2025
- 2024
- 2023
- 2022
- 2021
- 2020
- 2019
- 2018
- 2017
- 2016
- 2015
- 2014
- 2013
- 2012
- 2011
- 2010
- 2009
- 2008
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- 2006
- 2005
2026
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Computational modelling of toroidal membranes at division and fission sites
Graham CLB, Parrag M, Stansfeld PJ, Rodrigues CDA
Biophys J 2026
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Membrane orientation regulates GAPR-1 oligomerization that is suitable for interaction with beclin 1
Shen Z, Corey RA, van Doorne H, Verhoek I, Koopman R, Huitema DS, Sardana S, Baggelaar MP, Stansfeld PJ, Kaloyanova DV, Helms JB
Cell Mol Life Sci 2026;83(1)
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Diverse ancestral myosin motors generate and segregate distinct types of nanocluster-rich domains at the plasma membrane
Sil P, van Zanten TS, Jahnavi S, Bansal A, Razmazma H, Saha S, Mahajan B, Kumar M, Stansfeld PJ, Singh PP, Rao M, Mayor S
Sci Adv 2026;12(37):eaeb8889
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Structure and substrate recognition by the bacterial twin-arginine translocation (Tat) core complex
Deme JC, Bryant OJ, Batista MRB, Stansfeld PJ, Berks BC, Lea SM
Nat Microbiol 2026;11(7):2047-2064
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Essential role of MptB in the biosynthesis of phosphatidylinositol mannosides, lipomannan and lipoarabinomannan in mycobacteria
Šarkan M, Forbak M, Brown CM, Gilleron M, Angala SK, De K, Tymčuková V, Gašparovič H, Guerin ME, Nigou J, Mikušová K, Stansfeld PJ, Jackson M, Korduláková J
J Biol Chem 2026;302(6):113077
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4-Aryl-2-aminoimidazole analogues of bromoageliferin with antimicrobial activity against Acinetobacter baumannii show in vitro inhibition of translocase MraY on the peptidoglycan biosynthesis pathway
Murphy R, Fairbairn JA, Baileeves BWA, Stansfeld PJ, Bugg TDH
Bioorg Med Chem Lett 2026;136:130597
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Insights from aquaporin structures into drug-resistant sleeping sickness
Matusevicius M, Corey RA, Gragera M, Yamashita K, Sprenger T, Ungogo M, Blaza JN, Castro-Hartmann P, Chirgadze DY, Chaitanya Vedithi S, Afanasyev P, Melero R, Warshamanage R, Gusach A, Carazo JM, Carrington M, Blundell T, Murshudov GN, Stansfeld PJ, Sansom MSP, De Koning HP, Tate CG, Weyand S
Elife 2026;14
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Structural basis of outer membrane biogenesis by the TamAB translocase
Yang B, Fan R, Batista MB, Chen Y, Duan X, Wang R, Li D, Stansfeld PJ, Zhang Z, Dong C
Nat Commun 2026;17(1):437
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MemPrO: A Predictive Tool for Membrane Protein Orientation
Parrag M, Stansfeld PJ
J Chem Theory Comput 2026;22(1):638-652
2025
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Structural snapshots of Pseudomonas aeruginosa LptB2FG and LptB2FGC reveal insights into lipopolysaccharide recognition and transport
Fiorentino F, Cervoni M, Wang Y, Urner LH, Sauer JB, Tran A, Corey RA, Rotili D, Mai A, Stansfeld PJ, Imperi F, Yu EW, Su CC, Robinson CV, Bolla JR
Nat Commun 2025;16(1):11384
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Structural basis of undecaprenyl phosphate glycosylation leading to polymyxin resistance in Gram-negative bacteria
Ashraf KU, Bunoro-Batista M, Ansell TB, Punetha A, Rosario-Garrido S, Firlar E, Kaelber JT, Stansfeld PJ, Petrou VI
Nat Commun 2025;16(1):10978
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Mechanistic basis of antimicrobial resistance mediated by the phosphoethanolamine transferase MCR-1
Zinkle AP, Batista MB, Herrera CM, Erramilli SK, Kloss B, Ashraf KU, Nosol K, Zhang G, Cater RJ, Marty MT, Kossiakoff AA, Trent MS, Nygaard R, Stansfeld PJ, Mancia F
Nat Commun 2025;16(1):10516
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Structural characterization of the YbbAP-TesA ABC transporter identifies it as a lipid hydrolase complex that extracts hydrophobic compounds from the bacterial inner membrane
McAndrew MBL, Cook J, Gill A, Sahoo K, Thomas C, Stansfeld PJ, Crow A
PLoS Biol 2025;23(11):e3003427
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Structural basis of lipopolysaccharide assembly by the outer membrane translocon holo-complex
Chen H, Siroy A, Morales V, Gurvič D, Quentin Y, Balor S, Abuta'a YA, Marteau M, Froment C, Caumont-Sarcos A, Marcoux J, Stansfeld PJ, Fronzes R, Ieva R
Nat Commun 2025;16(1):10404
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CCD2MD: A Suite of Packages for Preparing Co-Folded Outputs for Molecular Dynamics Simulations
Blow KE, Parrag M, Stansfeld PJ
J Chem Inf Model 2025;65(22):12145-12154
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MreB filaments in the elongasome modulate E. coli membrane curvature
Baileeves BWA, Hoang ADQ, Bugg TDH, Stansfeld PJ
Biophys J 2025;124(21):3583-3595
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A porin-like protein used by bacterial predators defines a wider lipid-trapping superfamily
Parr RJ, Santin YG, Ratkevičiūte G, Caulton SG, Radford P, Gurvič D, Jenkins M, Doyle MT, Mead L, Silale A, van den Berg B, Knowles TJ, Sockett RE, Stansfeld PJ, Laloux G, Lovering AL
Nat Commun 2025;16(1):6213
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Conformational dynamics and membrane insertion mechanism of B4GALNT1 in ganglioside synthesis
Welland JWJ, Barrow HG, Stansfeld PJ, Deane JE
Nat Commun 2025;16(1):5442
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A lysis less ordinary: The bacterial Type 10 Secretion System
Chowdhury M, Stansfeld PJ, Sargent F
Adv Microb Physiol 2025;86:175-198
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Engineering cardiolipin binding to an artificial membrane protein reveals determinants for lipid-mediated stabilization
Abramsson ML, Corey RA, Skerle JL, Persson LJ, Anden O, Oluwole AO, Howard RJ, Lindahl E, Robinson CV, Strisovsky K, Marklund EG, Drew D, Stansfeld PJ, Landreh M
Elife 2025;14
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Mechanistic studies of mycobacterial glycolipid biosynthesis by the mannosyltransferase PimE
Liu Y, Brown CM, Borges N, Nobre RN, Erramilli S, Belcher Dufrisne M, Kloss B, Giacometti S, Esteves AM, Timóteo CG, Tokarz P, Cater RJ, Lowary TL, Morita YS, Kossiakoff AA, Santos H, Stansfeld PJ, Nygaard R, Mancia F
Nat Commun 2025;16(1):3974
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Structural insights into terminal arabinosylation of mycobacterial cell wall arabinan
Liu Y, Brown CM, Erramilli S, Su YC, Guu SY, Tseng PS, Wang YJ, Duong NH, Tokarz P, Kloss B, Han CR, Chen HY, Rodrigues J, Khoo KH, Archer M, Kossiakoff AA, Lowary TL, Stansfeld PJ, Nygaard R, Mancia F
Nat Commun 2025;16(1):3973
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Molecular basis for the phosphorylation of bacterial tyrosine kinase Wzc
Yang Y, Batista M, Clarke BR, Agyare-Tabbi MR, Song H, Kuehfuss NM, Le Bas A, Robinson CV, Whitfield C, Stansfeld PJ, Naismith JH, Liu J
Nat Commun 2025;16(1):3437
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MprF from Pseudomonas aeruginosa is a promiscuous lipid scramblase with broad substrate specificity
Hankins MTK, Parrag M, Garaeva AA, Earp JC, Seeger MA, Stansfeld PJ, Bublitz M
Sci Adv 2025;11(15):eads9135
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Antimicrobial triazinedione inhibitors of the translocase MraY-protein E interaction site: synergistic effects with bacitracin imply a new mechanism of action
Fairbairn JA, Kerr RV, Pierre-White NA, Jacovides A, Baileeves BWA, Stansfeld PJ, Bringmann G, Merritt AT, Bugg TDH
RSC Med Chem 2025;16(4):1641-1653
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Partitioning of fatty acids between membrane and storage lipids controls ER membrane expansion
Lysyganicz PK, Barbosa AD, Khondker S, Stewart NA, Carman GM, Stansfeld PJ, Dymond MK, Siniossoglou S
EMBO J 2025;44(3):781-800
2024
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Structure of the MlaC-MlaD complex reveals molecular basis of periplasmic phospholipid transport
Wotherspoon P, Johnston H, Hardy DJ, Holyfield R, Bui S, Ratkevičiūtė G, Sridhar P, Colburn J, Wilson CB, Colyer A, Cooper BF, Bryant JA, Hughes GW, Stansfeld PJ, Bergeron JRC, Knowles TJ
Nat Commun 2024;15(1):6394
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Membraneless channels sieve cations in ammonia-oxidizing marine archaea
von Kügelgen A, Cassidy CK, van Dorst S, Pagani LL, Batters C, Ford Z, Löwe J, Alva V, Stansfeld PJ, Bharat TAM
Nature 2024;630(8015):230-236
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Detergents with Scalable Properties Identify Noncanonical Lipopolysaccharide Binding to Bacterial Inner Membrane Proteins
Urner LH, Fiorentino F, Shutin D, Sauer JB, Agasid MT, El-Baba TJ, Bolla JR, Stansfeld PJ, Robinson CV
J Am Chem Soc 2024;146(16):11025-30
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Peptidoglycan synthesis drives a single population of septal cell wall synthases during division in Bacillus subtilis
Whitley KD, Grimshaw J, Roberts DM, Karinou E, Stansfeld PJ, Holden S
Nat Microbiol 2024;9(4):1064-1074
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Synthesis of lipid-linked precursors of the bacterial cell wall is governed by a feedback control mechanism in Pseudomonas aeruginosa
Marmont LS, Orta AK, Baileeves BWA, Sychantha D, Fernández-Galliano A, Li YE, Greene NG, Corey RA, Stansfeld PJ, Clemons WM, Bernhardt TG
Nat Microbiol 2024;9(3):763-775
2023
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Biophysical basis of filamentous phage tactoid-mediated antibiotic tolerance in P. aeruginosa
Böhning J, Graham M, Letham SC, Davis LK, Schulze U, Stansfeld PJ, Corey RA, Pearce P, Tarafder AK, Bharat TAM
Nat Commun 2023;14(1):8429
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LipIDens: simulation assisted interpretation of lipid densities in cryo-EM structures of membrane proteins
Ansell TB, Song W, Coupland CE, Carrique L, Corey RA, Duncan AL, Cassidy CK, Geurts MMG, Rasmussen T, Ward AB, Siebold C, Stansfeld PJ, Sansom MSP
Nat Commun 2023;14(1):7774
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LptM promotes oxidative maturation of the lipopolysaccharide translocon by substrate binding mimicry
Yang Y, Chen H, Corey RA, Morales V, Quentin Y, Froment C, Caumont-Sarcos A, Albenne C, Burlet-Schiltz O, Ranava D, Stansfeld PJ, Marcoux J, Ieva R
Nat Commun 2023;14(1):6368
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Structure of the native chemotaxis core signaling unit from phage E-protein lysed E. coli cells
Cassidy CK, Qin Z, Frosio T, Gosink K, Yang Z, Sansom MSP, Stansfeld PJ, Parkinson JS, Zhang P
mBio 2023;14(5):e0079323
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Structural basis of peptidoglycan synthesis by E. coli RodA-PBP2 complex
Nygaard R, Graham CLB, Belcher Dufrisne M, Colburn JD, Pepe J, Hydorn MA, Corradi S, Brown CM, Ashraf KU, Vickery ON, Briggs NS, Deering JJ, Kloss B, Botta B, Clarke OB, Columbus L, Dworkin J, Stansfeld PJ, Roper DI, Mancia F
Nat Commun 2023;14(1):5151
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PLSCR1 is a cell-autonomous defence factor against SARS-CoV-2 infection
Xu D, Jiang W, Wu L, Gaudet RG, Park ES, Su M, Cheppali SK, Cheemarla NR, Kumar P, Uchil PD, Grover JR, Foxman EF, Brown CM, Stansfeld PJ, Bewersdorf J, Mothes W, Karatekin E, Wilen CB, MacMicking JD
Nature 2023;619(7971):819-827
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Cyclic di-AMP traps proton-coupled K+ transporters of the KUP family in an inward-occluded conformation
Fuss MF, Wieferig JP, Corey RA, Hellmich Y, Tascón I, Sousa JS, Stansfeld PJ, Vonck J, Hänelt I
Nat Commun 2023;14(1):3683
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Activator-induced conformational changes regulate division-associated peptidoglycan amidases
Cook J, Baverstock TC, McAndrew MBL, Roper DI, Stansfeld PJ, Crow A
Proc Natl Acad Sci U S A 2023;120(24):e2302580120
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Structural basis for membrane attack complex inhibition by CD59
Couves EC, Gardner S, Voisin TB, Bickel JK, Stansfeld PJ, Tate EW, Bubeck D
Nat Commun 2023;14(1):890
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Characterization of a TatA/TatB binding site on the TatC component of the Escherichia coli twin arginine translocase
Severi E, Bunoro Batista M, Lannoy A, Stansfeld PJ, Palmer T
Microbiology (Reading) 2023;169(2)
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Supramolecular organization and dynamics of mannosylated phosphatidylinositol lipids in the mycobacterial plasma membrane
Brown CM, Corey RA, Grélard A, Gao Y, Choi YK, Luna E, Gilleron M, Destainville N, Nigou J, Loquet A, Fullam E, Im W, Stansfeld PJ, Chavent M
Proc Natl Acad Sci U S A 2023;120(5):e2212755120
2022
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Cardiolipin, and not monolysocardiolipin, preferentially binds to the interface of complexes III and IV
Corey RA, Harrison N, Stansfeld PJ, Sansom MSP, Duncan AL
Chem Sci 2022;13(45):13489-13498
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High-resolution reconstruction of a Jumbo-bacteriophage infecting capsulated bacteria using hyperbranched tail fibers
Ouyang R, Costa AR, Cassidy CK, Otwinowska A, Williams VCJ, Latka A, Stansfeld PJ, Drulis-Kawa Z, Briers Y, Pelt DM, Brouns SJJ, Briegel A
Nat Commun 2022;13(1):7241
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Interrogation of the Pathogen Box reveals small molecule ligands against the mycobacterial trehalose transporter LpqY-SugABC
Radhakrishnan A, Brown CM, Guy CS, Cooper C, Pacheco-Gomez R, Stansfeld PJ, Fullam E
RSC Med Chem 2022;13(10):1225-1233
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Inhibited KdpFABC transitions into an E1 off-cycle state
Silberberg JM, Stock C, Hielkema L, Corey RA, Rheinberger J, Wunnicke D, Dubach VRA, Stansfeld PJ, Hänelt I, Paulino C
Elife 2022;11
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The dynamic interplay of PIP2 and ATP in the regulation of the KATP channel
Pipatpolkai T, Usher SG, Vedovato N, Ashcroft FM, Stansfeld PJ
J Physiol 2022;600(20):4503-4519
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Seipin concentrates distinct neutral lipids via interactions with their acyl chain carboxyl esters
Renne MF, Corey RA, Ferreira JV, Stansfeld PJ, Carvalho P
J Cell Biol 2022;221(9)
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Structural, Functional and Computational Studies of Membrane Recognition by Plasmodium Perforin-Like Proteins 1 and 2
Williams SI, Yu X, Ni T, Gilbert RJC, Stansfeld PJ
J Mol Biol 2022;434(13):167642
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Conformational dynamics of the membrane enzyme LspA upon antibiotic and substrate binding
Caldwell TA, Vickery ON, Colburn JD, Stansfeld PJ, Columbus L
Biophys J 2022;121(11):2078-2083
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Peptidoglycan biosynthesis is driven by lipid transfer along enzyme-substrate affinity gradients
Oluwole AO, Corey RA, Brown CM, Hernández-Rocamora VM, Stansfeld PJ, Vollmer W, Bolla JR, Robinson CV
Nat Commun 2022;13(1):2278
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Structural basis of lipopolysaccharide maturation by the O-antigen ligase
Ashraf KU, Nygaard R, Vickery ON, Erramilli SK, Herrera CM, McConville TH, Petrou VI, Giacometti SI, Dufrisne MB, Nosol K, Zinkle AP, Graham CLB, Loukeris M, Kloss B, Skorupinska-Tudek K, Swiezewska E, Roper DI, Clarke OB, Uhlemann AC, Kossiakoff AA, Trent MS, Stansfeld PJ, Mancia F
Nature 2022;604(7905):371-376
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Structure, substrate recognition and initiation of hyaluronan synthase
Maloney FP, Kuklewicz J, Corey RA, Bi Y, Ho R, Mateusiak L, Pardon E, Steyaert J, Stansfeld PJ, Zimmer J
Nature 2022;604(7904):195-201
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PyLipID: A Python Package for Analysis of Protein-Lipid Interactions from Molecular Dynamics Simulations
Song W, Corey RA, Ansell TB, Cassidy CK, Horrell MR, Duncan AL, Stansfeld PJ, Sansom MSP
J Chem Theory Comput 2022;18(2):1188-1201
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High-resolution mapping of metal ions reveals principles of surface layer assembly in Caulobacter crescentus cells
Herdman M, von Kügelgen A, Kureisaite-Ciziene D, Duman R, El Omari K, Garman EF, Kjaer A, Kolokouris D, Löwe J, Wagner A, Stansfeld PJ, Bharat TAM
Structure 2022;30(2):215-228.e5
2021
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Mechanism of lipid droplet formation by the yeast Sei1/Ldb16 Seipin complex
Klug YA, Deme JC, Corey RA, Renne MF, Stansfeld PJ, Lea SM, Carvalho P
Nat Commun 2021;12(1):5892
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Relative Affinities of Protein-Cholesterol Interactions from Equilibrium Molecular Dynamics Simulations
Ansell TB, Curran L, Horrell MR, Pipatpolkai T, Letham SC, Song W, Siebold C, Stansfeld PJ, Sansom MSP, Corey RA
J Chem Theory Comput 2021;17(10):6548-6558
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CG2AT2: an Enhanced Fragment-Based Approach for Serial Multi-scale Molecular Dynamics Simulations
Vickery ON, Stansfeld PJ
J Chem Theory Comput 2021;17(10):6472-6482
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Deciphering ion transport and ATPase coupling in the intersubunit tunnel of KdpFABC
Silberberg JM, Corey RA, Hielkema L, Stock C, Stansfeld PJ, Paulino C, Hänelt I
Nat Commun 2021;12(1):5098
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Identification and assessment of cardiolipin interactions with E. coli inner membrane proteins
Corey RA, Song W, Duncan AL, Ansell TB, Sansom MSP, Stansfeld PJ
Sci Adv 2021;7(34)
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An outer-pore gate modulates the pharmacology of the TMEM16A channel
Dinsdale RL, Pipatpolkai T, Agostinelli E, Russell AJ, Stansfeld PJ, Tammaro P
Proc Natl Acad Sci U S A 2021;118(34)
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Identification and Characterization of Specific Protein-Lipid Interactions Using Molecular Simulation
Corey RA, Sansom MSP, Stansfeld PJ
Methods Mol Biol 2021;2315:121-139
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A Bacterial Inflammation Sensor Regulates c-di-GMP Signaling, Adhesion, and Biofilm Formation
Perkins A, Tudorica DA, Teixeira RD, Schirmer T, Zumwalt L, Ogba OM, Cassidy CK, Stansfeld PJ, Guillemin K
mBio 2021;12(3):e0017321
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NaViA: a program for the visual analysis of complex mass spectra
Quetschlich D, Esser TK, Newport TD, Fiorentino F, Shutin D, Chen S, Davis R, Lovera S, Liko I, Stansfeld PJ, Robinson CV
Bioinformatics 2021;37(24):4876-4878
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From Bench to Biomolecular Simulation: Phospholipid Modulation of Potassium Channels
Pipatpolkai T, Quetschlich D, Stansfeld PJ
J Mol Biol 2021;433(17):167105
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Switching Cytolytic Nanopores into Antimicrobial Fractal Ruptures by a Single Side Chain Mutation
Hammond K, Cipcigan F, Al Nahas K, Losasso V, Lewis H, Cama J, Martelli F, Simcock PW, Fletcher M, Ravi J, Stansfeld PJ, Pagliara S, Hoogenboom BW, Keyser UF, Sansom MSP, Crain J, Ryadnov MG
ACS Nano 2021;15(6):9679-9689
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Cryo-EM Structures of CusA Reveal a Mechanism of Metal-Ion Export
Moseng MA, Lyu M, Pipatpolkai T, Glaza P, Emerson CC, Stewart PL, Stansfeld PJ, Yu EW
mBio 2021;12(2)
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Alternative Architecture of the E. coli Chemosensory Array
Burt A, Cassidy CK, Stansfeld PJ, Gutsche I
Biomolecules 2021;11(4)
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Structural basis of trehalose recognition by the mycobacterial LpqY-SugABC transporter
Furze CM, Delso I, Casal E, Guy CS, Seddon C, Brown CM, Parker HL, Radhakrishnan A, Pacheco-Gomez R, Stansfeld PJ, Angulo J, Cameron AD, Fullam E
J Biol Chem 2021;296:100307
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Membrane Binding of Antimicrobial Peptides Is Modulated by Lipid Charge Modification
Simcock PW, Bublitz M, Cipcigan F, Ryadnov MG, Crain J, Stansfeld PJ, Sansom MSP
J Chem Theory Comput 2021;17(2):1218-1228
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Dynamics of an LPS translocon induced by substrate and an antimicrobial peptide
Fiorentino F, Sauer JB, Qiu X, Corey RA, Cassidy CK, Mynors-Wallis B, Mehmood S, Bolla JR, Stansfeld PJ, Robinson CV
Nat Chem Biol 2021;17(2):187-195
2020
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Evaluating inositol phospholipid interactions with inward rectifier potassium channels and characterising their role in disease
Pipatpolkai T, Corey RA, Proks P, Ashcroft FM, Stansfeld PJ
Commun Chem 2020;3(1):147
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The SARS-COV-2 Spike Protein Binds Sialic Acids and Enables Rapid Detection in a Lateral Flow Point of Care Diagnostic Device
Baker AN, Richards SJ, Guy CS, Congdon TR, Hasan M, Zwetsloot AJ, Gallo A, Lewandowski JR, Stansfeld PJ, Straube A, Walker M, Chessa S, Pergolizzi G, Dedola S, Field RA, Gibson MI
ACS Cent Sci 2020;6(11):2046-2052
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Insights into bacterial cell division from a structure of EnvC bound to the FtsX periplasmic domain
Cook J, Baverstock TC, McAndrew MBL, Stansfeld PJ, Roper DI, Crow A
Proc Natl Acad Sci U S A 2020;117(45):28355-28365
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The Unconventional Cytoplasmic Sensing Mechanism for Ethanol Chemotaxis in Bacillus subtilis
Tohidifar P, Bodhankar GA, Pei S, Cassidy CK, Walukiewicz HE, Ordal GW, Stansfeld PJ, Rao CV
mBio 2020;11(5)
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Greasing the Gears of Mechanosensitive Piezo Channels with Phosphoinositides and Cholesterol
Stansfeld PJ
Biophys J 2020;119(8):1467-1469
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Structures of the stator complex that drives rotation of the bacterial flagellum
Deme JC, Johnson S, Vickery O, Aron A, Monkhouse H, Griffiths T, James RH, Berks BC, Coulton JW, Stansfeld PJ, Lea SM
Nat Microbiol 2020;5(12):1553-1564
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Conformational dynamics of a G protein-coupled receptor helix 8 in lipid membranes
Dijkman PM, Muñoz-García JC, Lavington SR, Kumagai PS, Dos Reis RI, Yin D, Stansfeld PJ, Costa-Filho AJ, Watts A
Sci Adv 2020;6(33):eaav8207
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Atomistic mechanism of transmembrane helix association
Domański J, Sansom MSP, Stansfeld PJ, Best RB
PLoS Comput Biol 2020;16(6):e1007919
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New insights into KATP channel gene mutations and neonatal diabetes mellitus
Pipatpolkai T, Usher S, Stansfeld PJ, Ashcroft FM
Nat Rev Endocrinol 2020;16(7):378-393
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Multiple lipid binding sites determine the affinity of PH domains for phosphoinositide-containing membranes
Yamamoto E, Domański J, Naughton FB, Best RB, Kalli AC, Stansfeld PJ, Sansom MSP
Sci Adv 2020;6(8):eaay5736
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Characterizing Membrane Association and Periplasmic Transfer of Bacterial Lipoproteins through Molecular Dynamics Simulations
Rao S, Bates GT, Matthews CR, Newport TD, Vickery ON, Stansfeld PJ
Structure 2020;28(4):475-487.e3
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Complete structure of the chemosensory array core signalling unit in an E. coli minicell strain
Burt A, Cassidy CK, Ames P, Bacia-Verloop M, Baulard M, Huard K, Luthey-Schulten Z, Desfosses A, Stansfeld PJ, Margolin W, Parkinson JS, Gutsche I
Nat Commun 2020;11(1):743
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Structural basis of proton-coupled potassium transport in the KUP family
Tascón I, Sousa JS, Corey RA, Mills DJ, Griwatz D, Aumüller N, Mikusevic V, Stansfeld PJ, Vonck J, Hänelt I
Nat Commun 2020;11(1):626
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Targeting of proteins to the twin-arginine translocation pathway
Palmer T, Stansfeld PJ
Mol Microbiol 2020;113(5):861-871
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Structure and dynamics of the E. coli chemotaxis core signaling complex by cryo-electron tomography and molecular simulations
Cassidy CK, Himes BA, Sun D, Ma J, Zhao G, Parkinson JS, Stansfeld PJ, Luthey-Schulten Z, Zhang P
Commun Biol 2020;3(1):24
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A bipartite structural organization defines the SERINC family of HIV-1 restriction factors
Pye VE, Rosa A, Bertelli C, Struwe WB, Maslen SL, Corey R, Liko I, Hassall M, Mattiuzzo G, Ballandras-Colas A, Nans A, Takeuchi Y, Stansfeld PJ, Skehel JM, Robinson CV, Pizzato M, Cherepanov P
Nat Struct Mol Biol 2020;27(1):78-83
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A Mass-Spectrometry-Based Approach to Distinguish Annular and Specific Lipid Binding to Membrane Proteins
Bolla JR, Corey RA, Sahin C, Gault J, Hummer A, Hopper JTS, Lane DP, Drew D, Allison TM, Stansfeld PJ, Robinson CV, Landreh M
Angew Chem Int Ed Engl 2020;59(9):3523-3528
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In Situ Structure of an Intact Lipopolysaccharide-Bound Bacterial Surface Layer
von Kügelgen A, Tang H, Hardy GG, Kureisaite-Ciziene D, Brun YV, Stansfeld PJ, Robinson CV, Bharat TAM
Cell 2020;180(2):348-358.e15
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The energetics of protein-lipid interactions as viewed by molecular simulations
Corey RA, Stansfeld PJ, Sansom MSP
Biochem Soc Trans 2020;48(1):25-37
2019
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Structural basis for substrate specificity and regulation of nucleotide sugar transporters in the lipid bilayer
Parker JL, Corey RA, Stansfeld PJ, Newstead S
Nat Commun 2019;10(1):4657
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Sharing Data from Molecular Simulations
Abraham M, Apostolov R, Barnoud J, Bauer P, Blau C, Bonvin AMJJ, Chavent M, Chodera J, Čondić-Jurkić K, Delemotte L, Grubmüller H, Howard RJ, Jordan EJ, Lindahl E, Ollila OHS, Selent J, Smith DGA, Stansfeld PJ, Tiemann JKS, Trellet M, Woods C, Zhmurov A
J Chem Inf Model 2019;59(10):4093-4099
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The structural basis of lipid scrambling and inactivation in the endoplasmic reticulum scramblase TMEM16K
Bushell SR, Pike ACW, Falzone ME, Rorsman NJG, Ta CM, Corey RA, Newport TD, Christianson JC, Scofano LF, Shintre CA, Tessitore A, Chu A, Wang Q, Shrestha L, Mukhopadhyay SMM, Love JD, Burgess-Brown NA, Sitsapesan R, Stansfeld PJ, Huiskonen JT, Tammaro P, Accardi A, Carpenter EP
Nat Commun 2019;10(1):3956
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Insights into Membrane Protein-Lipid Interactions from Free Energy Calculations
Corey RA, Vickery ON, Sansom MSP, Stansfeld PJ
J Chem Theory Comput 2019;15(10):5727-5736
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A heuristic derived from analysis of the ion channel structural proteome permits the rapid identification of hydrophobic gates
Rao S, Klesse G, Stansfeld PJ, Tucker SJ, Sansom MSP
Proc Natl Acad Sci U S A 2019;116(28):13989-13995
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The molecular basis for an allosteric inhibition of K+-flux gating in K2P channels
Rinné S, Kiper AK, Vowinkel KS, Ramírez D, Schewe M, Bedoya M, Aser D, Gensler I, Netter MF, Stansfeld PJ, Baukrowitz T, Gonzalez W, Decher N
Elife 2019;8
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A lipid gating mechanism for the channel-forming O antigen ABC transporter
Caffalette CA, Corey RA, Sansom MSP, Stansfeld PJ, Zimmer J
Nat Commun 2019;10(1):824
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The MemProtMD database: a resource for membrane-embedded protein structures and their lipid interactions
Newport TD, Sansom MSP, Stansfeld PJ
Nucleic Acids Res 2019;47(D1):D390-D397
2018
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Water and hydrophobic gates in ion channels and nanopores
Rao S, Lynch CI, Klesse G, Oakley GE, Stansfeld PJ, Tucker SJ, Sansom MSP
Faraday Discuss 2018;209(0):231-247
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Interactions of a Bacterial Cu(I)-ATPase with a Complex Lipid Environment
Autzen HE, Koldsø H, Stansfeld PJ, Gourdon P, Sansom MSP, Nissen P
Biochemistry 2018;57(28):4063-4073
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Lipid binding attenuates channel closure of the outer membrane protein OmpF
Liko I, Degiacomi MT, Lee S, Newport TD, Gault J, Reading E, Hopper JTS, Housden NG, White P, Colledge M, Sula A, Wallace BA, Kleanthous C, Stansfeld PJ, Bayley H, Benesch JLP, Allison TM, Robinson CV
Proc Natl Acad Sci U S A 2018;115(26):6691-6696
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Interactions of the EphA2 Kinase Domain with PIPs in Membranes: Implications for Receptor Function
Chavent M, Karia D, Kalli AC, Domański J, Duncan AL, Hedger G, Stansfeld PJ, Seiradake E, Jones EY, Sansom MSP
Structure 2018;26(7):1025-1034.e2
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Structures of monomeric and oligomeric forms of the Toxoplasma gondii perforin-like protein 1
Ni T, Williams SI, Rezelj S, Anderluh G, Harlos K, Stansfeld PJ, Gilbert RJC
Sci Adv 2018;4(3):eaaq0762
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Crystal structure of undecaprenyl-pyrophosphate phosphatase and its role in peptidoglycan biosynthesis
El Ghachi M, Howe N, Huang CY, Olieric V, Warshamanage R, Touzé T, Weichert D, Stansfeld PJ, Wang M, Kerff F, Caffrey M
Nat Commun 2018;9(1):1078
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Balancing Force Field Protein-Lipid Interactions To Capture Transmembrane Helix-Helix Association
Domański J, Sansom MSP, Stansfeld PJ, Best RB
J Chem Theory Comput 2018;14(3):1706-1715
2017
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Substrate-triggered position switching of TatA and TatB during Tat transport in Escherichia coli
Habersetzer J, Moore K, Cherry J, Buchanan G, Stansfeld PJ, Palmer T
Open Biol 2017;7(8)
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Structural analysis of P. falciparum KAHRP and PfEMP1 complexes with host erythrocyte spectrin suggests a model for cytoadherent knob protrusions
Cutts EE, Laasch N, Reiter DM, Trenker R, Slater LM, Stansfeld PJ, Vakonakis I
PLoS Pathog 2017;13(8):e1006552
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Structural insights into the mechanism of the membrane integral N-acyltransferase step in bacterial lipoprotein synthesis
Wiktor M, Weichert D, Howe N, Huang CY, Olieric V, Boland C, Bailey J, Vogeley L, Stansfeld PJ, Buddelmeijer N, Wang M, Caffrey M
Nat Commun 2017;8:15952
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Computational studies of membrane proteins: from sequence to structure to simulation
Stansfeld PJ
Curr Opin Struct Biol 2017;45:133-141
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A BEST example of channel structure annotation by molecular simulation
Rao S, Klesse G, Stansfeld PJ, Tucker SJ, Sansom MSP
Channels (Austin) 2017;11(4):347-353
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The role of interfacial lipids in stabilizing membrane protein oligomers
Gupta K, Donlan JAC, Hopper JTS, Uzdavinys P, Landreh M, Struwe WB, Drew D, Baldwin AJ, Stansfeld PJ, Robinson CV
Nature 2017;541(7637):421-424
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Convergence and Sampling in Determining Free Energy Landscapes for Membrane Protein Association
Domański J, Hedger G, Best RB, Stansfeld PJ, Sansom MSP
J Phys Chem B 2017;121(15):3364-3375
2016
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Assembling the Tat protein translocase
Alcock F, Stansfeld PJ, Basit H, Habersetzer J, Baker MA, Palmer T, Wallace MI, Berks BC
Elife 2016;5
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Calmodulin Regulates Human Ether à Go-Go 1 (hEAG1) Potassium Channels through Interactions of the Eag Domain with the Cyclic Nucleotide Binding Homology Domain
Lörinczi E, Helliwell M, Finch A, Stansfeld PJ, Davies NW, Mahaut-Smith M, Muskett FW, Mitcheson JS
J Biol Chem 2016;291(34):17907-18
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Interaction of lipids with the neurotensin receptor 1
Bolivar JH, Muñoz-García JC, Castro-Dopico T, Dijkman PM, Stansfeld PJ, Watts A
Biochim Biophys Acta 2016;1858(6):1278-87
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Structural basis of lipoprotein signal peptidase II action and inhibition by the antibiotic globomycin
Vogeley L, El Arnaout T, Bailey J, Stansfeld PJ, Boland C, Caffrey M
Science 2016;351(6275):876-80
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Structural basis of outer membrane protein insertion by the BAM complex
Gu Y, Li H, Dong H, Zeng Y, Zhang Z, Paterson NG, Stansfeld PJ, Wang Z, Zhang Y, Wang W, Dong C
Nature 2016;531(7592):64-9
2015
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Ternary structure reveals mechanism of a membrane diacylglycerol kinase
Li D, Stansfeld PJ, Sansom MSP, Keogh A, Vogeley L, Howe N, Lyons JA, Aragao D, Fromme P, Fromme R … Caffrey M
Nat Commun 2015;6:10140
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A Coarse Grained Model for a Lipid Membrane with Physiological Composition and Leaflet Asymmetry
Sharma S, Kim BN, Stansfeld PJ, Sansom MS, Lindau M
PLoS One 2015;10(12):e0144814
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The centriolar protein CPAP G-box: an amyloid fibril in a single domain
Cutts EE, Inglis A, Stansfeld PJ, Vakonakis I, Hatzopoulos GN
Biochem Soc Trans 2015;43(5):838-43
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Structure and function of the Escherichia coli Tol-Pal stator protein TolR
Wojdyla JA, Cutts E, Kaminska R, Papadakos G, Hopper JT, Stansfeld PJ, Staunton D, Robinson CV, Kleanthous C
J Biol Chem 2015;290(44):26675-87
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The TatC component of the twin-arginine protein translocase functions as an obligate oligomer
Cléon F, Habersetzer J, Alcock F, Kneuper H, Stansfeld PJ, Basit H, Wallace MI, Berks BC, Palmer T
Mol Microbiol 2015;98(1):111-29
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MemProtMD: Automated Insertion of Membrane Protein Structures into Explicit Lipid Membranes
Stansfeld PJ, Goose JE, Caffrey M, Carpenter EP, Parker JL, Newstead S, Sansom MS
Structure 2015;23(7):1350-61
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Lipopolysaccharide is inserted into the outer membrane through an intramembrane hole, a lumen gate, and the lateral opening of LptD
Gu Y, Stansfeld PJ, Zeng Y, Dong H, Wang W, Dong C
Structure 2015;23(3):496-504
2014
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Dimerization of the EphA1 receptor tyrosine kinase transmembrane domain: Insights into the mechanism of receptor activation
Chavent M, Chetwynd AP, Stansfeld PJ, Sansom MS
Biochemistry 2014;53(42):6641-52
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Structural basis for outer membrane lipopolysaccharide insertion
Dong H, Xiang Q, Gu Y, Wang Z, Paterson NG, Stansfeld PJ, He C, Zhang Y, Wang W, Dong C
Nature 2014;511(7507):52-6
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Structural biology of Tat protein transport
Berks BC, Lea SM, Stansfeld PJ
Curr Opin Struct Biol 2014;27:32-7
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Direct gating of ATP-activated ion channels (P2X2 receptors) by lipophilic attachment at the outer end of the second transmembrane domain
Rothwell SW, Stansfeld PJ, Bragg L, Verkhratsky A, North RA
J Biol Chem 2014;289(2):618-26
2013
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Structural analysis of the G-box domain of the microcephaly protein CPAP suggests a role in centriole architecture
Hatzopoulos GN, Erat MC, Cutts E, Rogala KB, Slater LM, Stansfeld PJ, Vakonakis I
Structure 2013;21(11):2069-77
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Side pockets provide the basis for a new mechanism of Kv channel-specific inhibition
Marzian S, Stansfeld PJ, Rapedius M, Rinné S, Nematian-Ardestani E, Abbruzzese JL, Steinmeyer K, Sansom MS, Sanguinetti MC, Baukrowitz T, Decher N
Nat Chem Biol 2013;9(8):507-13
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Structures of ABCB10, a human ATP-binding cassette transporter in apo- and nucleotide-bound states
Shintre CA, Pike AC, Li Q, Kim JI, Barr AJ, Goubin S, Shrestha L, Yang J, Berridge G, Ross J, Stansfeld PJ, Sansom MS, Edwards AM, Bountra C, Marsden BD, von Delft F, Bullock AN, Gileadi O, Burgess-Brown NA, Carpenter EP
Proc Natl Acad Sci U S A 2013;110(24):9710-5
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Multiscale simulations reveal conserved patterns of lipid interactions with aquaporins
Stansfeld PJ, Jefferys EE, Sansom MS
Structure 2013;21(5):810-9
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The structural basis of ZMPSTE24-dependent laminopathies
Quigley A, Dong YY, Pike AC, Dong L, Shrestha L, Berridge G, Stansfeld PJ, Sansom MS, Edwards AM, Bountra C, von Delft F, Bullock AN, Burgess-Brown NA, Carpenter EP
Science 2013;339(6127):1604-7
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Simulation-based prediction of phosphatidylinositol 4,5-bisphosphate binding to an ion channel
Schmidt MR, Stansfeld PJ, Tucker SJ, Sansom MS
Biochemistry 2013;52(2):279-81
2012
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Structure of the TatC core of the twin-arginine protein transport system
Rollauer SE, Tarry MJ, Graham JE, Jääskeläinen M, Jäger F, Johnson S, Krehenbrink M, Liu SM, Lukey MJ, Marcoux J, McDowell MA, Rodriguez F, Roversi P, Stansfeld PJ, Robinson CV, Sansom MS, Palmer T, Högbom M, Berks BC, Lea SM
Nature 2012;492(7428):210-4
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A leucine zipper motif essential for gating of hyperpolarization-activated channels
Wemhöner K, Silbernagel N, Marzian S, Netter MF, Rinné S, Stansfeld PJ, Decher N
J Biol Chem 2012;287(48):40150-60
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State-independent intracellular access of quaternary ammonium blockers to the pore of TREK-1
Rapedius M, Schmidt MR, Sharma C, Stansfeld PJ, Sansom MS, Baukrowitz T, Tucker SJ
Channels (Austin) 2012;6(6):473-8
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Functional analysis of missense variants in the TRESK (KCNK18) K channel
Andres-Enguix I, Shang L, Stansfeld PJ, Morahan JM, Sansom MS, Lafrenière RG, Roy B, Griffiths LR, Rouleau GA, Ebers GC, Cader ZM, Tucker SJ
Sci Rep 2012;2:237
2011
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From Coarse Grained to Atomistic: A Serial Multiscale Approach to Membrane Protein Simulations
Stansfeld PJ, Sansom MS
J Chem Theory Comput 2011;7(4):1157-66
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Molecular simulation approaches to membrane proteins
Stansfeld PJ, Sansom MS
Structure 2011;19(11):1562-72
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Biophysical and computational studies of membrane penetration by the GRP1 pleckstrin homology domain
Lumb CN, He J, Xue Y, Stansfeld PJ, Stahelin RV, Kutateladze TG, Sansom MS
Structure 2011;19(9):1338-46
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The pore structure and gating mechanism of K2P channels
Piechotta PL, Rapedius M, Stansfeld PJ, Bollepalli MK, Ehrlich G, Andres-Enguix I, Fritzenschaft H, Decher N, Sansom MS, Tucker SJ, Baukrowitz T
EMBO J 2011;30(17):3607-19
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A conserved tryptophan at the membrane-water interface acts as a gatekeeper for Kir6.2/SUR1 channels and causes neonatal diabetes when mutated
Männikkö R, Stansfeld PJ, Ashcroft AS, Hattersley AT, Sansom MS, Ellard S, Ashcroft FM
J Physiol 2011;589(Pt 13):3071-83
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A specific two-pore domain potassium channel blocker defines the structure of the TASK-1 open pore
Streit AK, Netter MF, Kempf F, Walecki M, Rinné S, Bollepalli MK, Preisig-Müller R, Renigunta V, Daut J, Baukrowitz T, Sansom MS, Stansfeld PJ, Decher N
J Biol Chem 2011;286(16):13977-84
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Mechanistic insight into human ether-à-go-go-related gene (hERG) K+ channel deactivation gating from the solution structure of the EAG domain
Muskett FW, Thouta S, Thomson SJ, Bowen A, Stansfeld PJ, Mitcheson JS
J Biol Chem 2011;286(8):6184-91
2010
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Lipidbook: a public repository for force-field parameters used in membrane simulations
Domański J, Stansfeld PJ, Sansom MS, Beckstein O
J Membr Biol 2010;236(3):255-8
2009
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PIP(2)-binding site in Kir channels: definition by multiscale biomolecular simulations
Stansfeld PJ, Hopkinson R, Ashcroft FM, Sansom MS
Biochemistry 2009;48(46):10926-33
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Simulations of the BM2 proton channel transmembrane domain from influenza virus B
Rouse SL, Carpenter T, Stansfeld PJ, Sansom MS
Biochemistry 2009;48(42):9949-51
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The response of the tandem pore potassium channel TASK-3 (K(2P)9.1) to voltage: gating at the cytoplasmic mouth
Ashmole I, Vavoulis DV, Stansfeld PJ, Mehta PR, Feng JF, Sutcliffe MJ, Stanfield PR
J Physiol 2009;587(Pt 20):4769-83
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Ion-blocking sites of the Kir2.1 channel revealed by multiscale modeling
Tai K, Stansfeld PJ, Sansom MS
Biochemistry 2009;48(36):8758-63
2008
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Insight into the mechanism of inactivation and pH sensitivity in potassium channels from molecular dynamics simulations
Stansfeld PJ, Grottesi A, Sands ZA, Sansom MS, Gedeck P, Gosling M, Cox B, Stanfield PR, Mitcheson JS, Sutcliffe MJ
Biochemistry 2008;47(28):7414-22
2007
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Activation gating of hERG potassium channels: S6 glycines are not required as gating hinges
Hardman RM, Stansfeld PJ, Dalibalta S, Sutcliffe MJ, Mitcheson JS
J Biol Chem 2007;282(44):31972-81
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The selectivity, voltage-dependence and acid sensitivity of the tandem pore potassium channel TASK-1: contributions of the pore domains
Yuill KH, Stansfeld PJ, Ashmole I, Sutcliffe MJ, Stanfield PR
Pflugers Arch 2007;455(2):333-48
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Drug block of the hERG potassium channel: insight from modeling
Stansfeld PJ, Gedeck P, Gosling M, Cox B, Mitcheson JS, Sutcliffe MJ
Proteins 2007;68(2):568-80
2006
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Molecular mechanisms for drug interactions with hERG that cause long QT syndrome
Stansfeld PJ, Sutcliffe MJ, Mitcheson JS
Expert Opin Drug Metab Toxicol 2006;2(1):81-94
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Drug binding interactions in the inner cavity of HERG channels: molecular insights from structure-activity relationships of clofilium and ibutilide analogs
Perry M, Stansfeld PJ, Leaney J, Wood C, de Groot MJ, Leishman D, Sutcliffe MJ, Mitcheson JS
Mol Pharmacol 2006;69(2):509-19
2005
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Structural features of the glutamate binding site in recombinant NR1/NR2A N-methyl-D-aspartate receptors determined by site-directed mutagenesis and molecular modeling
Chen PE, Geballe MT, Stansfeld PJ, Johnston AR, Yuan H, Jacob AL, Snyder JP, Traynelis SF, Wyllie DJ
Mol Pharmacol 2005;67(5):1470-84